Useful Links
  Major sequence repositorie
+ GenBank : All known nucleotide and protein sequences; International Nucleotide Sequence Database Collaboration
+ EMBL Nucleotide Sequence Database : All known nucleotide and protein sequences; International Nucleotide Sequence Database Collaboration
+ DNA Data Bank of Japan (DDBJ) : All known nucleotide and protein sequences; International Nucleotide Sequence Database Collaboration
+ Genome Sequence Database :(GSDB) All known nucleotide and protein sequences
+ TIGR Gene Indices : Non-redundant, gene-oriented clusters
+ UniGene : Non-redundant, gene-oriented clusters
  Comparative Genomics

+ Clusters of Orthologous Groups (COG) :Phylogenetic classification of proteins from 21 complete genomes
+ XREFdb : Cross-referencing of model organism genetics with mammalian phenotypes

   Metabolic Pathways and Cellular Regulation
+ Kyoto Encyclopedia of Genes and Genomes (KEGG) :Metabolic and regulatory pathways
+ EcoCyc : Escherichia coli K-12 genome, gene products and metabolic pathways
+ ENZYME : Enzyme nomenclature
+ EpoDB : Genes expressed during human erythropoiesis
+ FlyNets : Drosophila melanogaster molecular interactions
+ Klotho : Collection and categorization of biological compounds
+ LIGAND : Enzymatic ligands, substrates and reactions
+ RegulonDB : Escherichia coli pathways and regulation
+ UM-BBD : Microbial biocatalytic reactions and biodegradation pathways primarily for xenobiotic, chemical compounds
+ WIT2 : Integrated system for functional curation and development of metabolic models
 Protein Databases
+ AARSDB : Aminoacyl-tRNA synthetase sequences
+ DAtA : Annotated coding sequences from Arabidopsis
+ DExH/D Family Database : DEAD-box, DEAH-box and DExH-box proteins
+ Endogenous GPCR List : G protein-coupled receptors; expression in cell lines
+ ESTHER : Esterases and -hydrolase enzymes and relatives
+ FUNPEP : Low-complexity or compositionally-biased protein sequences
+ GenProtEC : Escherichia coli genes, gene products and homologs
+ GPCRDB : G protein-coupled receptors
+ Histone Sequence Database : Histone and histone-fold sequences and structures
+ HIV Molecular Immunology Database : HIV epitopes
+ Homeobox Page : Information relevant to homeobox proteins, classification and evolution
+ Homeodomain Resource
Homeodomain sequences, structures, and related genetic and genomic information
+ HUGE : Large (>50 kDa) human proteins and cDNA sequences
+ IMGT : Immunoglobulin, T cell receptor and MHC sequences
+ InBase : Intervening protein sequences (inteins) and motifs
+ Kabat Database : Sequences of proteins of immunological interest
+ LGIC : Ligand-gated ion channel sequences, alignments and phylogeny
+ Membrane Protein Database
Membrane protein sequences, transmembrane regions and structures
+ MEROPS : Peptidase sequences and structures
+ MHCPEP : MHC-binding peptides
+ NRR : Steroid and thyroid hormone receptor superfamily
+ Olfactory Receptor Database : Sequences for olfactory receptor-like molecules
+ ooTFD : Transcription factors and gene expression
+ Peptaibol : Peptaibol (antibiotic peptide) sequences
+ PhosphoBase : Protein phosphorylation sites
+ PKR :Protein kinase sequences, enzymology, genetics, and molecular and structural properties
+ PPMdb : Arabidopsis plasma membrane protein sequence and expression data
+ Prolysis : Proteases and natural and synthetic protease inhibitors
+ PROMISE : Prosthetic centers and metal ions in protein active sites
+ Protein Information Resource (PIR) : Non-redundant protein sequence database
+ Receptor Database (RDP) : Receptor protein sequences
+ Ribonuclease P Database : RNase P sequences, alignments and structures
+ SENTRA : Sensory signal transduction proteins
+ SWISS-PROT/TrEMBL : Curated protein sequences
+ TRANSFAC : Transcription factors and binding sites
+ Wnt Database : Wnt proteins and phenotypes
 Protein Sequence Motifs
+ BLOCKS : Protein sequence motifs and alignments
+ PROSITE : Biologically-significant protein patterns and profiles
+ Pfam : Multiple sequence alignments and hidden Markov models of common protein domains
+ O-GLYCBASE : Glycoproteins and O-linked glycosylation sites
+ PIR-ALN : Protein sequence alignments
+ PRINTS : Protein squence motifs and signatures
+ ProClass : Families defined by PROSITE patterns and PIR superfamilies
+ ProDom : Protein domain families
+ ProtoMap : Automated hierarchical classification of SWISS-PROT proteins
+ SBASE : Annotated protein domain sequences
+ SMART : Signalling domain sequences
+ SYSTERS : Protein clusters
 Structure
+ PDB : Structure data determined by X-ray crystallography and NMR
+ CATH : Hierarchical classification of protein domain structures
+ SCOP : Familial and structural protein relationships
+ ASTRAL : Analysis of protein structures and their sequences
+ BioImage : Searchable database of multi-dimensional biological images
+ BioMagResBank : NMR spectroscopic data from proteins, peptides and nucleic acids
+ CSD : Crystal structure information for organic and metal organic compounds.
+ Database of Macromolecular Movements : Descriptions of protein and macromolecular motions, including movies
+ Decoys 'R' Us : Computer-generated protein conformations based on sequence data
+ HIC-Up : Structures of small molecules ('hetero-compounds')
+ HSSP : Structural families and alignments; structurally-conserved regions and domain architecture
+ IMB Jena Image Library
Visualization and analysis of three-dimensional biopolymer structures
+ ISSD : Integrated sequence and structural information
+ LPFC : Library of protein family core structures
+ MMDB : All three-dimensional structures, linked to NCBI Entrez system
+ MODBASE ?? : Comparative protein structure models
+ NDB : Nucleic acid-containing structures
+ PDB-REPRDB : Representative protein chains, based on PDB entries
+ PRESAGE : Protein structures with experimental and predictive annotations
+ Protein Motions Database : Motions of protein loops, domains and subunits
+ ProTherm : Thermodynamic data for wild-type and mutant proteins
+ RESID : Protein structure modifications
 
 
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